BDEPEND=sys-devel/gnuconfig >=app-portage/elt-patches-20250306 || ( >=dev-build/automake-1.19:1.19 >=dev-build/automake-1.18.1:1.18 ) || ( >=dev-build/autoconf-2.73:2.73 >=dev-build/autoconf-2.72-r1:2.72 ) >=dev-build/libtool-2.4.7-r3
DEFINED_PHASES=configure prepare pretend setup
DEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3 misc-haskell? ( dev-lang/ghc )
DESCRIPTION=Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
EAPI=8
HOMEPAGE=https://www.bcgsc.ca/resources/software/abyss/
INHERIT=autotools flag-o-matic toolchain-funcs
IUSE=openmp misc-haskell
KEYWORDS=~amd64 ~x86
LICENSE=GPL-3
RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3
SLOT=0
SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz
_eclasses_=autotools	8e8dec541e781133e5176ee95a872f17	flag-o-matic	fd3558f73f6503093adee69adf41020d	gnuconfig	b4fa4889c6f586d6b069215a86dd9e53	libtool	6a96cd90e5da8c7c615015479f46f1a4	toolchain-funcs	58a918e3a42d0156f010dcfd43725be5
_md5_=498079fc466ad15118faea6d1635cce8